High Performance Computing Applications for Science and Engineering,
About myself Publications Boosting the FM-index on the GPU: effective techniques to mitigate random memory accesses Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure TCBB - Transactions on Computational Biology and Bioinformatics [doi] [pdf] [pptx] [cite] FM-index on GPU: a cooperative scheme to reduce memory footprint Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure ISPA2014 - Symposium on Parallel & Distributed Processing with Applications 2014 [doi] [pdf] [pptx] [cite] Thread-cooperative, bit-parallel computation of Levenshtein distance on GPU ICS2014 – International Conference on Supercomputing 2014 [doi] [pdf] [pptx] [cite] n-step FM-Index for faster pattern matching Alejandro Chacón, Juan Carlos Moure, Antonio Espinosa, Porfidio Hernández ICCS2013 – International Conference on Computational Science 2013 [doi] [pdf] [pptx] [cite] Suffix-Array and FM-index analysis in Multi-ManyCore StudiesAlejandro Chacón, Pedro Erencia, Antonio Espinosa, Juan Carlos Moure, Porfidio Hernández JP2012 – Jornadas de Paralelismo 2012 [pdf] [pptx] [cite] Teaching Fall of 2014 Advanced Architectures (Practical seminars) Spring of 2014 Computer Architecture (Theoretical problems) Fall of 2013 Advanced Architectures (Practical seminars) Fall of 2013 Computer Architecture (Theoretical problems) Computer Architecture 2 (Theoretical problems and Practical seminars) Spring of 2012 Computer Architecture 2 (Theoretical problems and Practical seminars) Education
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